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ERX3217843: Illumina MiSeq paired end sequencing
1 ILLUMINA (Illumina MiSeq) run: 1.4M spots, 748.5M bases, 470.1Mb downloads

Submitted by: Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062) (Centre de Biologie pour la Gestion des Populations)
Study: Genome sequencing of the endosymbiotic consortium and mitochondrion of Cinara (Cinara) cuneomaculata species voucher ACOE2628
show Abstracthide Abstract
Within the Lachninae subfamily of aphids, a putative ancient pseudogenisation of the riboflavin biosynthetic genes in the Lachninae's Buchnera last common ancestor rendered Buchnera unable to supply this essential nutrient to the aphid, and thus triggered the establishment of secondary co-obligate endosymbionts. Through co-occurrence data of same-haplotype secondary endosymbionts across different populations, we determined that Cinara cuneomaculata apparently harbours an Erwinia-related symbiont as Buchnera's co-obligate endosymbiont. Metabolic reconstruction of these endosymbionts, corroborates the co-obligate nature of these, particularly due to the putative riboflavin-provider role assumed by Erwinia-related symbiont
Sample: Cicuneomaculata_1
SAMEA5383210 • ERS3189582 • All experiments • All runs
Library:
Name: S2_Jan2015
Instrument: Illumina MiSeq
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Nextera XT Library Kit (Illumina)
Runs: 1 run, 1.4M spots, 748.5M bases, 470.1Mb
Run# of Spots# of BasesSizePublished
ERR31900631,395,609748.5M470.1Mb2019-03-05

ID:
7383289

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